PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010104443.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family C2H2
Protein Properties Length: 419aa    MW: 45613.7 Da    PI: 9.3883
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010104443.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.50.0001180202223
                     EETTTTEEESSHHHHHHHHHH.T CS
         zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                      Cp Cg++F+  ++L+ H+ + H
  XP_010104443.1 180 ACPQCGEVFPKIESLELHQAVrH 202
                     6******************9888 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS501578.683179207IPR007087Zinc finger, C2H2
PROSITE patternPS000280179202IPR007087Zinc finger, C2H2
SuperFamilySSF563993.84E-28204414No hitNo description
Gene3DG3DSA:3.90.228.104.9E-17206414IPR012317Poly(ADP-ribose) polymerase, catalytic domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003950Molecular FunctionNAD+ ADP-ribosyltransferase activity
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 419 aa     Download sequence    Send to blast
MALLTFVSPE TTTTTEPKKP PTSKRRRKQD KRHHHHDDQQ KKKPVSSWDQ IKNLLTCKQI  60
EGSQVHDPSK NGVVGYSKLG SSCSSICSFR DVVHGNTRVV HRADNSPESS SLGQEAGLLS  120
RKAVNGSSSS TRSARSNCGA AYTSSSSRGM QFRKLSGCYE CHMIVDPSRY PITPRSTICA  180
CPQCGEVFPK IESLELHQAV RHAVSELGPE DSGRNIVEII FKSSWLKKDN PIFKIERILK  240
VHNTQRTIQR FEDCRDAVKA RALGSTRKNP RCAADGNELL RFHCTTLSCA LGARGASSLC  300
GSVPGCGVCT IIRHGFQGKN GGAGEGKGVW TTASSGRAHD SLKCTDGRRA MLVCRVIAGR  360
VKRVADDAAP EEDSVSLASS YDSVAGYAGI YSNLEELTVF NPRAILPCFV VIYKALESQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010104443.10.0hypothetical protein L484_016042
TrEMBLW9RZ950.0W9RZ95_9R
STRINGVIT_18s0001g14130.t010.0(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF103413037
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75710.11e-173C2H2-like zinc finger protein